我想在公司网络上使用Docker for Windows托管Shiny应用程序。
我如何设置Docker、odbc.ini、odbcinst.ini、freetds.conf或可能的其他文件,以便我的Shiny应用程序可以从内部Microsoft SQL Server (2016)数据库中查询数据?数据库服务器不是运行在运行Docker容器的同一台机器上。
我不知道我是否需要一个较新版本的FreeTDS,或者我是否错误地配置了其中的一个文件。我试着使用IP地址到服务器,而不是使用 sql-server.host.com
在所有文件中,但得到相同的错误信息,如下所示。
$ tsql -C
输出。
Compile-time settings (established with the "configure" script)
Version: freetds v1.00.104
freetds.conf directory: /etc/freetds
MS db-lib source compatibility: no
Sybase binary compatibility: yes
Thread safety: yes
iconv library: yes
TDS version: 4.2
iODBC: no
unixodbc: yes
SSPI "trusted" logins: no
Kerberos: yes
OpenSSL: no
GnuTLS: yes
MARS: no
$ odbcinst -j
输出。
unixODBC 2.3.6
DRIVERS............: /etc/odbcinst.ini
SYSTEM DATA SOURCES: /etc/odbc.ini
FILE DATA SOURCES..: /etc/ODBCDataSources
USER DATA SOURCES..: /root/.odbc.ini
SQLULEN Size.......: 8
SQLLEN Size........: 8
SQLSETPOSIROW Size.: 8
$ cat etc/odbcinst.ini
输出。
[FreeTDS]
Description = FreeTDS unixODBC Driver
Driver = /usr/lib/x86_64-linux-gnu/odbc/libtdsodbc.so
$ cat etc/odbc.ini
输出。
[sql-server]
driver = FreeTDS
server = sql-server.host.com
port = 1433
TDS_Version = 4.2
$ cat etc/freetds/freetds.conf
输出。
[sql-server]
host = sql-server.host.com
port = 1433
tds version = 4.2
R中的命令出错。
con <- dbConnect(odbc::odbc(),
driver = "FreeTDS",
server = "sql-server.host.com",
port = 1433,
database = "database name",
TDS_Version = 4.2)
错误:
Error: nanodbc/nanodbc.cpp:950: 08001: [FreeTDS][SQL Server]Unable to connect to data source
Execution halted
Docker文件。
# Install R version 3.5.3
FROM r-base:3.5.3
# Install Ubuntu packages
RUN apt-get update && apt-get install -y \
sudo \
gdebi-core \
pandoc \
pandoc-citeproc \
libcurl4-gnutls-dev \
libcairo2-dev/unstable \
libxt-dev \
libssl-dev \
unixodbc unixodbc-dev \
freetds-bin freetds-dev tdsodbc
# Edit odbc.ini, odbcinst.ini, and freetds.conf files
RUN echo "[sql-server]\n\
host = sql-server.host.com\n\
port = 1433\n\
tds version = 4.2" >> /etc/freetds.conf
RUN echo "[FreeTDS]\n\
Description = FreeTDS unixODBC Driver\n\
Driver = /usr/lib/x86_64-linux-gnu/odbc/libtdsodbc.so" >> /etc/odbcinst.ini
RUN echo "[sql-server]\n\
driver = FreeTDS\n\
server = sql-server.host.com\n\
port = 1433\n\
TDS_Version = 4.2" >> /etc/odbc.ini
# Install R packages that are required
RUN R -e "install.packages(c('shiny', 'DBI', 'odbc'), repos='http://cran.rstudio.com/')"
# copy the app to the image
RUN mkdir /root/shiny_example
COPY app /root/shiny_example
COPY Rprofile.site /usr/lib/R/etc/
# Make the ShinyApp available at port 801
EXPOSE 801
CMD ["R", "-e", "shiny::runApp('/root/shiny_example')"]
Docker构建和运行命令。
docker build . -t shiny_example
docker run -it --network=host -p 801:801 shiny_example
请注意,下面的R代码工作在我的Windows机器上运行Docker容器,我可以成功地查询数据库。
library(DBI)
con <- dbConnect(odbc::odbc(),
driver = "SQL server",
server = "sql-server.host.com")
$ isql -v sql-server
输出。
[S1000][unixODBC][FreeTDS][SQL Server]Unable to connect to data source
[01000][unixODBC][FreeTDS][SQL Server]Unknown host machine name.
[ISQL]ERROR: Could not SQLConnect
$ tsql -S sql-server
输出。
locale is "en_US.UTF-8"
locale charset is "UTF-8"
using default charset "UTF-8"
Error 20013 (severity 2):
Unknown host machine name.
There was a problem connecting to the server
显然,我不知道我在做什么。任何关于这方面的帮助都非常感激。
看起来你是正确的,但可能错过了一点。我也有类似的问题,但我能够解决它!
在 python
+mssqlserver
+pymssql
+docker(unbuntu16.04 base image)
在没有修复的情况下,我的代码(使用pymssql)在运行时是 给我这个错误
Traceback (most recent call last):
File "<stdin>", line 4, in <module>
File "src/pymssql.pyx", line 645, in pymssql.connect
pymssql.InterfaceError: Connection to the database failed for an unknown reason.
I 随后 创建了3个文件,并复制到图像中!
myserver.orgName.com
MSsql服务器所在的地方。dockerodbcinst.ini[FreeTDS]
Description = v0.91 with protocol v7.3
Driver = /usr/lib/x86_64-linux-gnu/odbc/libtdsodbc.so
dockerodbc.ini
[myserverdsn]
Driver = FreeTDS
Server = myserver.orgName.com
Port = 1433
TDS_Version = 7.3
dockerfreetds.conf
[global]
# TDS protocol version, use:
# 7.3 for SQL Server 2008 or greater (tested through 2014)
# 7.2 for SQL Server 2005
# 7.1 for SQL Server 2000
# 7.0 for SQL Server 7
tds version = 7.2
port = 1433
# Whether to write a TDSDUMP file for diagnostic purposes
# (setting this to /tmp is insecure on a multi-user system)
; dump file = /tmp/freetds.log
; debug flags = 0xffff
# Command and connection timeouts
; timeout = 10
; connect timeout = 10
# If you get out-of-memory errors, it may mean that your client
# is trying to allocate a huge buffer for a TEXT field.
# Try setting 'text size' to a more reasonable limit
text size = 64512
# A typical Microsoft server
[myserverdsn]
host = myserver.orgName.com
port = 1433
tds version = 7.3
Docker文件内容
RUN apt-get -y install unixodbc unixodbc-dev freetds-dev freetds-bin tdsodbc
COPY freetds.conf /etc/freetds/freetds.conf
COPY odbc.ini /etc/odbc.ini
COPY odbcinst.ini /etc/odbcinst.ini
测试python代码的工作。
python
>>> import pymssql
>>> conn = pymssql.connect(server = 'myserver.orgName.com',
user = 'myusername',
password = 'mypassword',
database= 'mydbname')
工作无误!